BCB 444/544
Introduction to Bioinformatics

Bioinformatics and Computational Biology
Iowa State University




Date Topic
8/24 Pairwise Alignment
8/26 Dynamic Programming
8/29 PAM Matrices
8/31 BLOSUM Matrices
9/12 Bayesian Evolutionary Distance
9/14 Multiple Sequence Alignment
9/16 Profiles
9/19 Hidden Markov Models
9/26 Perl Part I
9/28 Perl Part II
10/3 Database Searching - FASTA
10/5 Database Searching - BLAST
10/5 Introduction to Phylogenies
10/7 Phylogenies - Parsimony 1
10/10 Phylogenies - Parsimony 2
10/12 Phylogenies - Distance Methods
10/14 Phylogenies - Maximun Likelihood
10/17 Gene Prediction 1
Genes & Genomes.PDF
Genes & Genomes.PPT
10/19 Gene Prediction 2
Gene Regulation.PDF
Gene Regulation.PPT
10/21 Gene Prediction 3
Gene Prediction.PDF
Gene Prediction.PPT
   10/24
Promoter Prediction.PDF
Promoter Prediction.PPT
10/26
Promoter Prediction REALLY.PDF
Promoter Prediction REALLY.PPT
10/31 RNA Structure Function PDF
RNA Structure Function PPT
11/2
RNA Structure Prediction PDF
RNA Structure Prediction PPT
11/4
Protein Structure & Function PDF
Protein Structure & Function PPT
11/7
Protein Structure Classification, Databases,Visualization PDF
Protein Structure Classification, Databases,Visualization PPT
11/9
Protein Structure PDF
Protein Structure PPT
11/11
Protein Structure Prediction PDF
Protein Structure Prediction PPT
11/14
Protein Structure Prediction PDF
Protein Structure Prediction PPT
11/16
Genomics PDF
Genomics PPT
11/18
"-omics" : Experimental Methods PDF
"-omics" : Experimental Methods PPT
11/28
Machine Learning Algorithms
11/30
Microarray & Proteomics Analyses; Protein Function Prediction
12/2
Machine Learning PDF
12/5-9
Student Project Presentations